Abstract
Genetic lineage tracing has been used extensively in developmental biology. Many transcription factors expressed in sperm may induce Cre-mediated loxP recombination during early zygote development. In this study, we investigated the effect of sperm-expressed Cre on cell type-specific Cre-mediated loxP recombination in fate-mapping models of Tbx18+ progenitor cells. We found the recombination frequency in a reverse mating (RM) lineage was inconsistent with a normal Mendelian distribution. However, the recombination frequency in a positive mating (PM) lineage agreed with a Mendelian distribution. In the PM lineage, LacZ and EYFP were expressed in specific locations, such as the limb buds, heart, and hair follicles. Therefore, the reporter genes accurately and reliably traced cell differentiation in the PM lineage. In contrast, EYFP and LacZ were expressed throughout the embryo in the RM lineage. Thus, the reporter genes did not trace cell differentiation specifically in the RM lineage. Furthermore, Tbx18 mRNA and protein were expressed in the testicles of male mice, but almost no Tbx18 expression was detected in the ovaries of female mice. Similarly, reporter genes and Tbx18 were coexpressed in the seminiferous tubules and sperm cells of testicles. These results revealed that Cre-loxP-mediated pre-recombination in zygotes is due to Tbx18 expressed in testicle sperm cells when Cre is transmitted paternally. Our results indicate that Cre-mediated specific recombination in fate-mapping models of sperm-expressed genes may be influenced by the paternal origin of Cre. Therefore, a careful experimental design is critical when using the Cre-loxP system to trace spatial, temporal or tissue-specific fates.
Introduction
Lineage tracing is an essential tool for identifying the properties of all of the progeny of stem and progenitor cells in adult and embryonic tissues (Kretzschmar & Watt 2012). Genetic lineage tracing, which marks cells by genetic recombination, has been used extensively in developmental biology to explore which stem/progenitor cells in early embryos generate a specific structure, to identify their derivatives and to investigate the mechanism of differentiation (Laforest et al. 2014). The Cre-loxP system is most commonly used for genetic lineage tracing in mice (Kretzschmar & Watt 2012). Genetic lineage tracing is one of the most reliable means of monitoring the cell fate of cardiac progenitor cells in vivo and in vitro. Cre reporter mice, such as Rosa26LacZ and Rosa26EYFP, are useful for cell fate-mapping experiments and for monitoring Cre expression (Soriano 1999, Srinivas et al. 2001). Many transcription factors are expressed in sperm and eggs, and they may induce Cre-mediated excision of the loxP-flanked transcriptional ‘stop’ sequence during early zygote and embryonic stem cell development. Previous studies revealed that Tbx18 is important in the normal development of many different tissues and organs, including the heart, kidney, ureter, bladder, heart, limb, somite, hair follicle, and cochlea, and during mouse embryogenesis (Bussen et al. 2004, Cai et al. 2008, Trowe et al. 2008, Wehn & Chapman 2010, Grisanti et al. 2013, Xu et al. 2014). Tbx18+ progenitor cells differentiate into pacemaker cells, smooth muscle cells, and fibroblasts in the heart (Cai et al. 2008, Wiese et al. 2009, Liang et al. 2013, Wu et al. 2013). Similarly, Bohnenpoll et al. have shown that Tbx18+ cells are a pool of multipotent progenitor cells that contribute to stromal cells, mesangial cells, vascular smooth muscle cells within the kidney, and smooth muscle cells within the ureter and bladder (Bohnenpoll et al. 2013, Xu et al. 2014, Yan et al. 2014). Therefore, Tbx18 has been identified as a marker of multipotent progenitor cells. To monitor the fate of Tbx18+ progenitor cells in vivo and in vitro, Tbx18Cre/R26LacZ and Tbx18Cre/R26EYFP fate-mapping mice have been produced by crossing Tbx18Cre mice with Rosa26lacZ and Rosa26EYFP mice, respectively. Tbx18Cre knock-in mouse lines have been established by inserting a Cre-PGK-neo cassette into exon 1 of Tbx18 (Cai et al. 2008, Christoffels et al. 2009, Wiese et al. 2009, Bohnenpoll et al. 2013) or introducing a BAC-ICre ampicillin cassette into exon 1 of Tbx18 (Wang et al. 2009). However, these three Tbx18cre mice show partially different results in the heart and urinary system. The heart tissue revealed that Tbx18-expressing epicardial cells contribute to cardiomyocytes in the interventricular septum of Tbx18cre mice (Cai et al. 2008). In contrast, the genetic lineage study by Bohnenpoll et al. revealed that Tbx18-Cre cell lineage tracing with the PGK-neo cassette targeting vector does not contribute unequivocally to cardiomyocytes in the interventricular septum in vivo (Christoffels et al. 2009). Therefore, it is important to determine the influence of Cre-mediated recombination on reporter gene expression (e.g., LacZ and EYFP) in germline cells. However, it is not clear whether Cre recombinase expression is influenced by the distinctive spatiotemporal expression patterns of these reporter genes, as the origins of Cre have differed in these mouse models (paternal or maternal lineage), and Cre is activated by a Tbx18 promoter in the sperm or eggs of genetic lineage tracing mice (Cai et al. 2008, Christoffels et al. 2009, Smith 2011, Lee et al. 2013). Thus, this study assessed the effects of Cre-mediated recombination in male germ cells on reporter gene expression used for lineage tracing. We conducted genotyping analyses by PCR, and we performed X-gal or immunofluorescence staining for LacZ or EYFP expression to identify the Mendelian law and the specificity of the positioning of reporter gene expression in fate-mapping mice of Tbx18+ progenitor cells. Based on our results, we reveal that Cre-mediated site-specific recombination in fate-mapping models of a sperm-expressed transcription factor is influenced by the paternal origin of Cre.
Materials and methods
Mice
Tbx18Cre mice were genotyped by PCR as previously described (Cai et al. 2008). The Rosa26EYFP and Rosa26RlacZ reporter mice (Soriano 1999, Srinivas et al. 2001) were purchased from the Jackson Laboratory (Bar Harbor, ME, USA). The fate-mapping models were established by crossing female Tbx18Cre mice with male Rosa26RlacZ mice and female Tbx18Cre mice with male Rosa26REYFP mice. These matings were defined by having a maternal Cre origin (positive mating (PM)). Models were also established by crossing male Tbx18Cre mice with female Rosa26RlacZ mice and male Tbx18Cre mice with female Rosa26REYFP mice. These matings were defined by a paternal Cre (reverse mating (RM)). Tbx18Cre, Rosa26EYFP, and Rosa26lacZ mice lines were maintained in a C57BL/6 background (Hayashi et al. 2003). All experimental procedures were performed with the approval of the animal research committee of Chongqing Medical University.
PCR genotyping of transgenic mice
Tbx18Cre mice were genotyped by PCR as previously described (Cai et al. 2008). Rosa26lacZ (Soriano 1999) and Rosa26EYFP (Srinivas et al. 2001) mice lines were genotyped according to previously reported methods. Briefly, genomic DNA was extracted from mouse tail biopsies or yolk sacs by ethanol purification (Wang & Storm 2006). For genotyping, a PCR Master Mix (Promega) was used with the following specific primers: Tbx18Cre mice, 5′ GCC AGA GAA AGA GGA AAC GGC AAA 3′ and 5′ TCC CTG AAC ATG TCC ATC AGG TTC 3′ (Cai et al. 2008); Rosa26lacZ, 5′ GCG AAG AGT TTG TCC TCA ACC 3‘ and 5’ AAA GTC GCT CTG AGT TGT TAT 3′ (Soriano 1999); Rosa26EYFP, 5′ AAG ACC GCG AAG AGT TTG TC 3′ and 5′ AAA GTC GCT CTG AGT TGT TAT 3′ (Srinivas et al. 2001). The PCR conditions are shown in Table 1.
PCR conditions for genotyping.
Step | Temperature (°C) | Time | Note |
---|---|---|---|
Tbx18Cre mice | |||
1 | 94 | 3 min | |
2 | 94 | 30 s | |
3 | 58 | 45 s | |
4 | 72 | 45 s | Repeat steps 2–4 for 36 cycles |
5 | 72 | 2 min | |
6 | 10 | Hold | |
Rosa26EYFP and Rosa26LacZ mice | |||
1 | 94 | 3 min | |
2 | 94 | 30 s | |
3 | 58 | 1 min | |
4 | 72 | 1 min | Repeat steps 2–4 for 36 cycles |
5 | 72 | 2 min | |
6 | 10 | Hold |
Detection of EYFP expression in whole-mount embryos and embryonic hearts
EYFP reporter gene expression was determined using microdissected whole-mount embryos and embryonic hearts. The embryos and embryonic hearts were fixed in 4% paraformaldehyde (PFA) for 20 min. The EYFP signal in whole-mount lateral views of embryos and embryonic hearts was observed immediately under a fluorescence stereomicroscope (Leica MZ 16 F, Wetzlar, Germany). After whole-embryo imaging, embryos and embryonic hearts were embedded within OCT and cryosectioned (10 μm). EYFP fluorescence was observed in frozen tissue sections.
X-gal staining
We performed X-gal staining on whole-mount organs, embryos, and tissue sections (Nagy et al. 2007). Tbx18Cre/Rosa26LacZ embryos and tissues were washed three times in PBS at room temperature to remove blood, fixed in cold 4% PFA at 4 °C for 90 min, washed three times for 20 min each in β-gal washing buffer (2 mmol/l MgCl2, 0.01% sodium deoxycholate, 0.02% Nonidet-P40, and 100 mmol/l PBS buffer) at room temperature, stained in X-gal staining solution (5 mM potassium ferrocyanide, 5 mM potassium ferricyanide, 2 mmol/LMgCl2, 0.01% sodium deoxycholate, 0.02% NP40, 0.1% X-gal, and PBS buffer) for 16–24 h or longer at 37 °C in the dark, and washed three times at room temperature. The specimens were post-fixed in 4% PFA for 1 week and then imaged with a stereomicroscope. They were then paraffin-embedded and sectioned.
Real time RT-PCR
Total RNA from the testicles and ovaries of adult male and female Tbx18Cre, Rosa26EYFP/LacZ, and C57BL/6 mice was isolated using TRIzol Reagent (GIBCO). To assess the gene copy number of Cre and Tbx18 in each sample, cDNA was synthesized using the PrimeScript RT reagent kit Takara, Otsu, Japan; according to the manufacturer's instructions. Real-time qRT-PCR was performed with SYBR Green PCR master mix (Applied Biosystems) on a Real-Time PCR Detection System (Bio-Rad). GAPDH was used as a housekeeping gene for the normalization of the obtained results. The following primers were used: Cre (forward: 5‘-ATG GCC CGC GCT GGA GTT TC 3’ and reverse: 5′-GCC ATC TTC CAG CAG GCG CA 3′), TBX18 (forward: 5′-CCG CAG GCC CCG AGA GTA GAT 3′ and reverse: 5′-AAC ATG CGC CTG CCG GCT T 3′), and GAPDH (forward: 5′-AAA TGG TGA AGG TCG GTG TGA AC 3′ and reverse: 5′-CAA CAA TCT CCA CTT TGC CAC TG 3′).
Immunofluorescence staining
Immunofluorescence staining was performed as previously described (Cai et al. 2008). Testicular tissues from male mice and ovarian tissues from female mice were fixed in 4% PFA for ∼4 h, permeabilized in 0.5% Triton X-100 in PBS, and blocked in 5% BSA in PBS. Coverslips were incubated with goat anti-mouse Tbx18 antibody (Santa Cruz Biotechnology) at a 1:50 dilution in blocking buffer at 4 °C overnight. Samples were then washed and incubated with Cy3-labeled donkey anti-goat IgG secondary antibody (Beyotime, Shanghai, China) at a 1:100 dilution in blocking buffer for 1 h at 37 °C. Optical sections were visualized on a LEICA scanning laser confocal microscope.
Statistics
The gene copy numbers of Cre and Tbx18 mRNA are expressed as the mean±s.e.m. The significance of the differences between the two groups was evaluated by Student's two-tailed t-test. P<0.05 was considered significant.
Results
Genetic characteristics of PM and RM lineage offspring
We identified and screened mouse embryonic tissues by PCR to determine the Mendelian laws of inheritance in the PM and RM lineages (Fig. 1A, B, C, and D) (Kawamoto et al. 2000, Mao et al. 2001, Heinrich et al. 2004). The statistical analysis showed that approximately half of the offspring from the RM lineage inherited Cre and the Rosa26LacZ or EYFP reporter genes simultaneously (Table 2). The Cre-loxP-mediated Cre recombination frequency of the RM lineage double heterozygous mice was ∼1/2, which does not correspond to a normal Mendelian distribution. However, ∼1/4 of the offspring from the PM lineage inherited both Cre and the Rosa26LacZ or EYFP reporter genes; this recombination frequency was in accordance with the Mendelian law (Table 2) (Hayashi et al. 2003, Cochrane et al. 2007). To reveal the genetic features of the PM and RM lineages, we detected LacZ expression in all of the littermate embryos. As shown in Fig. 1E and F, the proportion of LacZ expression was 4/7 in all of the littermate embryos from the RM lineage. However, the recombination frequency of Cre-mediated lacZ expression was 1/4 in the PM lineage (Fig. 1F). These data indicated that the expression of reporter genes in fate-mapping mice of Tbx18+ progenitor cells from the RM lineage was not in accordance with Mendel's laws of inheritance.
The double-heterozygous offspring of the PM and RM lineages and their Mendelian characteristics.
Tbx18Cre/Rosa26EYFP | Tbx18Cre/Rosa26LacZ | |||
---|---|---|---|---|
PM lineage | RM lineage | PM lineage | RM lineage | |
Total offspring (n) | 126 | 114 | 88 | 101 |
Double heterozygous offspring (n) | 35 | 55 | 21 | 53 |
Cre-loxP mediated recombination frequency (%) | 27.8 | 48.2 | 23.9 | 52.5 |
PM lineage: female Tbx18Cre mice crossed to male Rosa26RlacZ mice or female Tbx18Cre mice crossed to male Rosa26REYFP mice. This mating defined Cre as originating from maternal lineage models and was referred to as PM (positive mating). RM lineage: male Tbx18Cre mice crossed to female Rosa26RlacZ mice or male Tbx18Cre mice crossed to female Rosa26REYFP mice. This mating defined Cre as originating from the paternal lineage model and was designated RM (reverse mating).
LacZ and EYFP reporter gene expression in PM and RM lineage offspring
In the RM lineage, EYFP was detected in whole-mount embryos of Tbx18Cre/Rosa26LacZ mice at embryonic day 14.5 (E14.5). Similarly, intense blue staining was observed throughout the Tbx18Cre/Rosa26LacZ embryo (Fig. 2A and D), suggesting that Cre is expressed throughout the embryo. Indeed, the expression of EYFP and LacZ in RM lineage fate-mapping mice was nonspecific. However, EYFP expression was present in developing limb buds, hair follicles, and the hearts of Tbx18Cre/Rosa26EYFP embryos in the PM lineage at E14.5 (Fig. 2B). Similarly, LacZ was expressed in specific sites in the Tbx18Cre/Rosa26LacZ embryos of the PM lineage at E14.5, including the limb buds, heart, and hair follicles throughout the skin, which was identified by whole-mount X-Gal staining (Fig. 2E); this result confirmed those of previous studies (Kraus et al. 2001, Bussen et al. 2004, Cai et al. 2008, Trowe et al. 2008, Grisanti et al. 2013). The spatial and temporal specificity of the expression and localization of the LacZ reporter gene were consistent with EYFP in the PM lineage fate-mapping models (Fig. 2B and E).
More in-depth observations were carried out at the tissue and organ levels with X-Gal staining and fluorescence analysis. In the PM lineage of Tbx18Cre/Rosa26LacZ and Tbx18Cre/Rosa26EYFP mice, the LacZ and EYFP reporter genes were expressed only at specific sites in the embryonic heart, including the coronary vasculature, epicardium, and part of the heart tissue (Fig. 3B, E, H, and K), as previously noted (Cai et al. 2008, Wu et al. 2013). In contrast, LacZ and EYFP were detected in the myocardium of whole-mount hearts in the RM lineages (Fig. 3A, D, G, and J), which suggested that the Tbx18+ cell fate-mapping models from RM lineages drive Cre recombinase for excessive recombination of floxed alleles in the developing hearts of embryos. The distinct expression pattern indicated that the reporter genes did not accurately and reliably trace the cell differentiation in fate-mapping models of paternal Cre.
Expression of Tbx18 and Cre in the germline
The reason for the aforementioned infidelity in the RM lineages is unclear. To determine why reporter genes did not accurately and reliably trace cell differentiation, we measured Tbx18 and Cre expression in the germline. Real-time PCR showed that Cre mRNA was only expressed in the testicles of male Tbx18Cre mice (Fig. 4A). Additionally, Tbx18 mRNA was expressed in the testicles of male Tbx18Cre, Rosa26LacZ, and Rosa26EYFPmice, but almost no expression was detected in the ovaries of female mice (Fig. 4A, B, and C). Immunofluorescence assays revealed that Tbx18 protein was only expressed in the testicles of male Tbx18Cre, Rosa26LacZ, Rosa26EYFP, and WT C57 mice, and almost no expression was detected in the ovaries of female mice (Fig. 5A, B, C, D, E, F, G, and H). Consequently, in the RM lineage with paternal Cre origin, Tbx18 mRNA and protein were expressed in sperm cells, which may explain this infidelity.
Expression of reporter genes in the germline
As shown in Fig. 2B and E, the reporter genes EYFP and LacZ can accurately and reliably trace cell differentiation in the PM lineage of Tbx18Cre/Rosa26LacZ and Tbx18Cre/Rosa26EYFP mice. In addition, Tbx18Cre-Rosa26 double heterozygous mice can be used to trace the expression of endogenous Tbx18. We detected the expression of EYFP and Lacz reporter genes in the germline. Whole-mount X-gal staining revealed Lacz expression in the testicles of male Tbx18Cre-Rosa26 double heterozygous mice (Fig. 6A). Furthermore, X-gal staining on cryosections showed Lacz expression within the seminiferous tubule and sperm cells of testicles (Fig. 6B and C). Similarly, immunofluorescence analysis showed EYFP expression within the seminiferous tubule and sperm cells of testicles (Fig. 6E and F). EYFP and Tbx18 were coexpressed in the seminiferous tubules and sperm cells (Fig. 6H), but X-gal staining did not detect Lacz in cryosections of the ovarian follicle (Fig. 6D). These results confirmed that Cre-loxP-mediated pre-recombination in zygotes is due to the early activation of Cre expression in the testicles when Tbx18Cre is transmitted paternally.
Discussion
Genetic lineage tracing techniques, which are based on the Cre-loxP system, have been used extensively in developmental biology to reveal the origin of progenitor cells in the early embryo (Kretzschmar & Watt 2012, Laforest et al. 2014). The expression of Cre recombinase is under the control of cell or tissue-specific promoters in Cre mouse lines. A Cre mouse is crossed with a Cre reporter mouse, such as Rosa26lacZ or Rosa26EYFP, which contains the EYFP or LacZ reporter genes flanked by a loxP-STOP-loxP sequence (Srinivas et al. 2001, Muzumdar et al. 2007, Kretzschmar & Watt 2012, Blanpain & Simons 2013, Kraus et al. 2014). In animals expressing both Cre and a floxed reporter gene, Cre activates EYFP or LacZ reporter gene expression by excising the STOP sequence specifically in the traced cells (Kretzschmar & Watt 2012). However, nonspecific reporter gene expression may occur in fate-mapping mice. The nonspecific expression pattern of reporter genes is caused by various factors, such as the differences in Cre lines and genes, Cre-mediated chromosome loss, death of proliferating cells, cytotoxic effects, or epigenetic modifications (Lomeli et al. 2000, Silver & Livingston 2001, Ramirez et al. 2004, Rassoulzadegan et al. 2006, Cochrane et al. 2007, Lee et al. 2013). However, it is not clear whether reporter genes are influenced by the origins of Cre from the paternal or maternal lineage in genetic lineage tracing mice. In the current study, we have compared the difference in reporter gene expression between paternal and maternal Cre lineages.
The Tbx18Cre/R26LacZ and Tbx18Cre/R26EYFP double heterozygous mice were produced for tracing the fate of Tbx18+ progenitor cells. Genetic fate mapping revealed that Tbx18+ progenitor cells play a critical role in the development of the kidneys, urinary tract, heart, limbs, somites, and hair follicles in mice (Airik et al. 2006, Cai et al. 2008, Trowe et al. 2008, Christoffels et al. 2009, Grisanti et al. 2013, Wu et al. 2013, Xu et al. 2014). Interestingly, we found that the LacZ and EYFP reporter genes were expressed in the whole mouse embryo and whole-mount hearts. Therefore, LacZ and EYFP did not accurately and reliably trace cell differentiation in fate-mapping models. Nevertheless, the reason for the nonspecific expression of EYFP and LacZ in the RM lineage is unclear. As shown in Figs 4, 5, and 6, Tbx18 mRNA and protein were expressed in sperm cells, but no expression was detected in the ovaries of female Cre mice. This result suggests that some sperm cells express Tbx18 if the zygote has Tbx18Cre and a Rosa indicator allele simultaneously, leading to excision in zygote cells. In the embryonic tissue from these zygotes, the embryos receiving the flanked indicator allele will show reporter activity in every single cell. Hence, in the RM lineage-derived double heterozygous Tbx18Cre/Rosa26LacZ and Tbx18Cre/Rosa26EYFP zygotes, Cre expression (activated by the Tbx18 promoter) and loxP-flanked allele expression (from the Rosa26 reporter mouse) appeared simultaneously. Thus, Cre-loxP recombination occurs early in zygotes or all embryonic stem cells when Tbx18Cre is transmitted paternally, which induced whole-mount expression of the reporter gene in all of the embryonic tissues. Based on our results, we conclude that Cre-mediated specific recombination in fate-mapping models of sperm-expressed transcription factors is influenced by the paternal origin of Cre.
A successful and specific fate-mapping model is important for research on stem cells and progenitor cells and in the medical field. The Cre-loxP system is an essential tool for studying gene function, allowing genetic inactivation or endogenous activation in a temporally or spatially regulated manner. However, this system also has caveats that affect loxP sequence recombination, such as nonspecific expression patterns, Cre toxicity, and a variation of Cre recombination efficiency, all of which may affect phenotypic interpretation (Schmidt-Supprian & Rajewsky 2007). Our results showed that sperm-expressed genes might be influenced by the paternal origin of Cre. Thus, when Cre-mediated recombination in the paternal germline is applied to a fate-mapping model of sperm-expressed genes, the expression of reporter genes in the reproductive system may be nonspecific (Wagner et al. 2001, Hafner et al. 2004, Ramirez et al. 2004, Casola et al. 2006). Our study mainly discussed Cre-mediated recombination in the reproductive system and demonstrated that different mating schemes arising from either paternally or maternally inherited transgenes may lead to different experimental outcomes. Because Cre-LoxP recombination can take place early in the zygote stage in an established fate-mapping Cre line, specific genes or transcription factors that are expressed in the reproductive system may lead to the expression of the reporter gene and support incorrect conclusions about cell differentiation.
Taken together, our results indicate that Cre-loxP recombination occurs early in zygotes or all embryonic stem cells when Tbx18Cre is transmitted paternally; the resultant nonspecific expression patterns induce reporter gene expression in all of the embryonic tissues. Consequently, Cre-mediated specific recombination in fate-mapping models of sperm-expressed genes or transcription factors may be influenced by the paternal origin of Cre. In our study, efficient and specific recombination occurred in the embryo when the Cre transgene was inherited from maternal lines; therefore, mating by maternal inheritance may be a feasible way to address the potential influences of sperm-expressed genes in fate-mapping models. In conclusion, a careful experimental design is warranted when using the Cre–loxP system to trace spatial, temporal, or tissue-specific gene fate mapping.
Declaration of interest
The authors declare that there is no conflict of interest that could be perceived as prejudicing the impartiality of the research reported.
Funding
This work was supported by grants from the National Natural Science Foundation of China (NSFC, No. 30971213, 81270211, 81100088), Higher Specialized Research Fund for the Doctoral Program (20125503110009), and Science and Technology Research Projects of Chongqing Education Commission (KJ130324).
Acknowledgements
The authors thank S M Evans (University of California, San Diego, CA, USA) for providing Tbx18Cre mice.
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(X Yuan and J L Du contributed equally to this work)